Software PackageDescriptionCategory
ABAQUS
Abinit
ADF
ADMET Predictor
Allpath
AMBER
ANSYS
Ansys14.0-fluent
Apache Server
ArcGIS
Arlequin
Armadillo
Astroid
Augustus
AutoDock
AutoDock4 AutoVina
BAPS
BASH
BEAST
Bedtools
Biopython
BISMARK
Bitcoin
BLAS
BLAST
Blender
BOOST
BOWTIE
BPP
BUCKy
Bugs
BWA
C
C++
CAD
CAFFE
CANTERA
CAVITY
CCSD EOM
CCSDT
CD
Celera Assembler
CERN's
CFD
CFX
CHARMM
ChiP-seq
Cint
CLAMP
Cling
Cloudy
Codelite
COMSQL
Crystal
CUDA
Cufflinks
custom perl
custom scripts
Cutadapt
cython
DaPars
De novo transcriptome assembly
DesignModeler
DiffSplice
Discovery Studios
DOCK
DSSAT
ea-utils
Editdist
EGLib
Eigensoft
emacs
ensorflow
ESPResSo
Excel
Extended Meshing
F90
FastQc
fastx_toolkit
FemLab
FEniCS_dolfin
FieldView
Filezilla
FLASH
Fluent
FORTRAN
FreeBayes
G++
GAMESS
GAUSSIAN
gcc
Gdata
GEANT4
Gemini
GeneMarkES
gfortan
GGCount
ggplot2
Glide
GMP
GMT
GNU
GNU Parallel
GNUPLOT
GPUs
GrammaTech CodeSurfer
graphviz
Gromacs
gsl
H5py
Hadoop
Hdf5
HElib
HISAT2
ifort
igraph
IGV
IMA2
Indelocator
Intel MKL
Intel MPI
Jags
Java
Jellyfish
jModelTest
JMONSEL
JMP
JMP Genomics 6.0
KATZ
kallisto
keras
LaGrange
LAMMPS
lanet
LAPACK
LaVision's DaVis
LexDock
lgl
libgsl.so.0
LibSVM
LigBuilder
lighttpd
Linux
LS-Dyna
MACH
MACS
MACS2
MaestroDesmond
Maker
MaSurCA
Mathematica
MATLAB
matplotlib libraries
MC-PEM
MedeA
MetaMap
Migrate
minia package
miRDeep2
MISO
Modeler
Modified Gaussian-Amber
MOLPRO
Monte Carlo
Mothur
MPI
MR
MrBayes
MS Excel
MSC Marc
MultiSplice
MuMax
Muscle
MVD
MySQL
NAMD
NCBI BLAST
NCBI Blast 2.2.28
nedit
NEWBLER
NIST
NLTK
Nmag
NTL Mathematical Library
NumPy
NWchem
Oasis
Octave
Oncotator
OOMMF
OpenACC
OpenEye
OpenMP
OpenNLP
Origin
PAML
PAUP*
pdbxer?
Perl
PetSs
PHP
Picard
PIV
PLINK
Pointwise
Postfix
PostgreSQL
PS14
psyLex
Pylearn2
PyMatGen
Pysam
Python
python-igraph
QChem
Quake
QUDA
R
R x64 2.15.2
Randfold
RASP
RAxML
RayTracer
Reptile
ROOT
RNA
ROSE
Rosetta
RSEM
RStudio
Samtools
SAS 9.3
SASS
ScaLAPACK
Scikit Learn
SciPy
SemRep
ShapeMapper
Simulink
SNAP
SnpEFF
Soap_ec.
SOAPdenovo2
Socorro
Spagedi
SSNMR Assignment Software Suite (SASS)
STACKS
STAR
Stata
STEM-Hy
Structure
SUNDIALS
SuperFold
SWAT
SWATCUP
Sybyl
Tasteful Server
TecPlot
Tensorflow
Theano
Toolkit
Tophat
Tree view
Trimmomatic
Trinity
turbomole
Twitter4J
VASP
Vectors
VELVET
Velvet assembler
vi
ViennaRNA
vim
Vina
VLC Media Player
VMD
Vowpal Wabbit
ZDock